PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0026307.1_g000001.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family E2F/DP
Protein Properties Length: 168aa    MW: 19194 Da    PI: 11.5996
Description E2F/DP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0026307.1_g000001.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1E2F_TDP41.91.7e-13110168251
                    E2F_TDP   2 keksLrlltqkflkllek..seegivtlnevakeLvse.......dvknkrRRiYDilN 51 
                                +eksL ll+q+f+kl+ +  se++ ++l+e+ak L+          +++k+RRiYDi+N
  Rmu_sc0026307.1_g000001.1 110 REKSLALLAQNFVKLFVCtgSESESISLDEAAKLLLGVgdpqnvsVMRTKVRRIYDIAN 168
                                79************988855677************87788****999***********9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 168 aa     Download sequence    
LLQFPQPLQP RRRRHSPDRP RRRRLAPRRR PPPDLRHRQR AGERRTAVKK VDFLLPGNPQ  60
TSRKSKNTYT WKGFGAVPNA LKELREEGLD LTPIPAACNN NNNPQDETKR EKSLALLAQN  120
FVKLFVCTGS ESESISLDEA AKLLLGVGDP QNVSVMRTKV RRIYDIAN
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
11124RRRRHSPDRPRRRR
21225RRRRHSPDRPRRRR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G48160.11e-28E2F/DP family protein