PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0026563.1_g000004.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family WOX
Protein Properties Length: 179aa    MW: 19943.5 Da    PI: 10.5516
Description WOX family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0026563.1_g000004.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox50.73.1e-16768257
                               T--SS--HHHHHHHHHHHHH..SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS
                   Homeobox  2 rkRttftkeqleeLeelFek..nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57
                               ++R+t+t++ +++L++l+++   r p+ae+++++  +l    +++ +++++WF N++a+e++
  Rmu_sc0026563.1_g000004.1  7 STRWTPTTDHIRILNKLYYNkgVRSPTAEQIQRICLQLklyrKIESKNIFYWFRNHKARERQ 68
                               58****************97789*************************************97 PP
2Wus_type_Homeobox92.83e-30670265
          Wus_type_Homeobox  2 artRWtPtpeQikiLeelyk.sGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65
                               ++tRWtPt++ i+iL++ly+ +G+r+P++e+iqri  +L+ y kie+kN+fyWF N+kaRerqk+
  Rmu_sc0026563.1_g000004.1  6 SSTRWTPTTDHIRILNKLYYnKGVRSPTAEQIQRICLQLKLYRKIESKNIFYWFRNHKARERQKK 70
                               689***************9779*****************************************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 179 aa     Download sequence    
MLCRRSSTRW TPTTDHIRIL NKLYYNKGVR SPTAEQIQRI CLQLKLYRKI ESKNIFYWFR  60
NHKARERQKK RLTSDVHVPM QRSGLVGNGN GTNWKPEDQY IKFGSSASAI ASASSADVIA  120
VNGQMGNYGG YGSMNMEKSF RDCSISAGGG TSSTGVGRSI SHNFGSWVGC RVDPYSSSS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G17950.17e-31WOX family protein