PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Rmu_sc0027087.1_g000001.1

Organism

Rosa multiflora

Taxonomic ID

74647

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa

Family

GRAS

Protein Properties

Length: 150aa MW: 17159.8 Da PI: 10.0186

Description

GRAS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Rmu_sc0027087.1_g000001.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	GRAS	141.1	1.1e-43	2	150	228	374
GRAS 228 LklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellgreivnvvacegae.rrerhe 310 L+l ksl+Pk+v++ e ea++n+ F+ rf al+yy+a+f+sle +++r+s er vEr llgr+i v e+ +r+r e Rmu_sc0027087.1_g000001.1 2 LRLAKSLNPKIVTLGEYEAKLNRVGFMSRFKTALKYYTAMFESLEPNMSRDSPERLQVERLLLGRRIAGGVGPEEPGtKRQRLE 85 899*******************************************************************99886699 PP GRAS 311 tlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslv.lgWkdrpLvsvSaWr 374 +e+W+ +e++GF+pv+ls++a++qa+ ll ++++ y++ e+ ++ l Wk+ pL++vS+Wr Rmu_sc0027087.1_g000001.1 86 DKEQWKFLMESSGFEPVALSHYAVSQARILLWNYSNASYSLIESPPGFLsLAWKEVPLFTVSSWR 150 *******************************999999888666666************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 150 aa Download sequence
ALRLAKSLNP KIVTLGEYEA KLNRVGFMSR FKTALKYYTA MFESLEPNMS RDSPERLQVE 60 RLLLGRRIAG GVGPEEPGTK RQRLEDKEQW KFLMESSGFE PVALSHYAVS QARILLWNYS 120 NASYSLIESP PGFLSLAWKE VPLFTVSSWR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G66770.1	6e-69	GRAS family protein