PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0029783.1_g000009.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family bHLH
Protein Properties Length: 269aa    MW: 29329.7 Da    PI: 6.928
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0029783.1_g000009.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH33.38.9e-11152199455
                                HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                        HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                                +h+ +Er RR++i +++  L++l+P +    +k   Ka +L + ++YI+sLq
  Rmu_sc0029783.1_g000009.1 152 SHSLAERARREKISERMKILQDLVPGC----NKVIGKALVLDEIINYIQSLQ 199
                                8*************************9....677*****************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 269 aa     Download sequence    
MDPPVSLVNE CSYSNGNATS YNLSEIWQFP MNSAGAGMGG GLGLRRPSFG QFGDVLGGGD  60
PNPMSLDHRA RKRRDAEDES SPSPKSSGNI GANGCDGKRL KTAGRCGDEN PEAKAEAETS  120
SGKPVEQNTQ PPDPPKQDYI HVRARRGQAT DSHSLAERAR REKISERMKI LQDLVPGCNK  180
VIGKALVLDE IINYIQSLQR QVEFLSMKLE AVNTRMTPAI EVFPSKEFGQ QTFDTAAMAF  240
GTQPPREYSR GSSPEWLHMQ VGGGFERTT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G59640.14e-92bHLH family protein