PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Rmu_sc0030540.1_g000003.1

Organism

Rosa multiflora

Taxonomic ID

74647

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa

Family

TCP

Protein Properties

Length: 141aa MW: 15550.3 Da PI: 10.2654

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Rmu_sc0030540.1_g000003.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	76.6	7.3e-24	55	128	2	75
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasecea 75 + +kdrhsk++T++g+Rd v + ++a++f+++qd+ G+d++sk+ +W +++ak+ai+el+ +s+s s ++ Rmu_sc0030540.1_g000003.1 55 TDRKDRHSKVYTAKGPRDHLVQITTHTAIQFYEVQDRVGYDRPSKAFNWIIKKAKAAIDELPPWNSNSISVQTT 128 679***********************************************************994444422222 PP

Sequence ? help Back to Top
Protein Sequence Length: 141 aa Download sequence
MEYAGRTMGE SHNNLHHRAM TSSSAASRLG LGIRTSSSSI ASEIVEARGH ILRATDRKDR 60 HSKVYTAKGP RDHLVQITTH TAIQFYEVQD RVGYDRPSKA FNWIIKKAKA AIDELPPWNS 120 NSISVQTTSS STVPISASQD T

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G15030.2	2e-32	TCP family protein