PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0030614.1_g000001.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family FAR1
Protein Properties Length: 244aa    MW: 27398.5 Da    PI: 4.345
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0030614.1_g000001.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR128.84e-091021385490
                       FAR1  54 traetrtgCkaklkvkkekdgkwevtkleleHnHela 90 
                                +ra tr g ka ++v+k+++g+++v+kle+ HnHel+
  Rmu_sc0030614.1_g000001.1 102 PRAITREGFKALMTVRKRENGRYYVAKLEKSHNHELV 138
                                6899*******************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 244 aa     Download sequence    
MQVWTEHYVM EVEVSSEEVV DSYVSLEDEG YEHCVVEDVE VRVVLDDVKE DNGDIDLVQY  60
MAGGDNGGII EPTLDMEFDS EDDARNFYNA YAKHIGFSIR GPRAITREGF KALMTVRKRE  120
NGRYYVAKLE KSHNHELVTP AMRHFLTSHK QECDPNQSSS NSFSSPGMSL DAPMNVLSDC  180
SSFGKMAFAV QSNASYIGRG RLSTFGIDAQ SLLGFFKIMQ ASDLAFYYAV QVDEEDRLST  240
VFLG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.15e-20FAR1 family protein