PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0031020.1_g000001.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family C2H2
Protein Properties Length: 137aa    MW: 14925 Da    PI: 8.7246
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0031020.1_g000001.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H216.23e-052143123
                               EEETTTTEEESSHHHHHHHHHHT CS
                    zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                               ++C +C+ksF++ + L  H++ H
  Rmu_sc0031020.1_g000001.1 21 FQCRHCPKSFTNGHALGGHQNAH 43
                               89*****************9988 PP
Sequence ? help Back to Top
Protein Sequence    Length: 137 aa     Download sequence    
MAPSRKTSTE DSTANSAPKY FQCRHCPKSF TNGHALGGHQ NAHRGLDKGM TKTLKQILAI  60
YREQFPGNSS SPSVAAEAKL LPSAEVTVGH GVVMPGRATE LPGGVRTIDF LKQWKPIYTD  120
PIVPVEIEEN LDLELKL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G01860.12e-07C2H2 family protein