PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Rmu_sc0031757.1_g000001.1

Organism

Rosa multiflora

Taxonomic ID

74647

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa

Family

WOX

Protein Properties

Length: 147aa MW: 16328.9 Da PI: 4.5141

Description

WOX family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Rmu_sc0031757.1_g000001.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	34.9	2.6e-11	5	47	20	57
HH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 20 ek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 k ryp+ e+++++ +l ++++++V++WFqN +a+ek+ Rmu_sc0031757.1_g000001.1 5 DKdLRYPTPEQIQDICLHLkqydQIEDKNVFFWFQNLKAREKQ 47 55589************************************97 PP
2	Wus_type_Homeobox	61.9	1.3e-20	4	48	20	64
Wus_type_Homeobox 20 yksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqk 64 y++ lr P+ e+iq+i +L++y +iedkNVf+WFQN kaRe+qk Rmu_sc0031757.1_g000001.1 4 YDKDLRYPTPEQIQDICLHLKQYDQIEDKNVFFWFQNLKAREKQK 48 67999***************************************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 147 aa Download sequence
VLYYDKDLRY PTPEQIQDIC LHLKQYDQIE DKNVFFWFQN LKAREKQKMR LIQNVRVGGS 60 LDVNFGSTSS TDDGGQTFME QRGGDHQEVE TLPLFPVHGE DVLGNPKTTS EEGSTYGYYS 120 GGSGGYNSGS HVSLELSLNP SGAADLA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G17950.1	1e-15	WOX family protein