PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0031822.1_g000001.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family B3
Protein Properties Length: 209aa    MW: 23927.9 Da    PI: 4.8949
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0031822.1_g000001.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B341.13.3e-1310703599
                               EEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS
                         B3 35 tltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99
                                  l+ +sg +Wev+l  +++ g++++++GW eF k   L+ gDf+vF+++g+s f   v +f++
  Rmu_sc0031822.1_g000001.1 10 SAFLKLPSGSEWEVEL--TRCNGKVWFERGWPEFSKFCSLDYGDFLVFRYEGNSIF--QVCIFDR 70
                               5678889*********..**********************************9999..9999997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 209 aa     Download sequence    
MKYGEDVSNS AFLKLPSGSE WEVELTRCNG KVWFERGWPE FSKFCSLDYG DFLVFRYEGN  60
SIFQVCIFDR TATEIDYPIK MPDMEKTDHE DEEDDNISIE ISEDSPPHPK TREKSPLPCP  120
PSFKKMRTSW SGKAADTMFG NDGGGSSSAR RYQKGTVEAI GEMHSLNKSE KAQALWRVDA  180
FISENPHFKV VLQPSYVQQS YLVRKLIEL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G49475.15e-19B3 family protein