PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Rmu_sc0033719.1_g000001.1

Organism

Rosa multiflora

Taxonomic ID

74647

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa

Family

MYB

Protein Properties

Length: 105aa MW: 11533 Da PI: 10.7634

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Rmu_sc0033719.1_g000001.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	61.3	2.1e-19	10	55	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +g+W+++Ed l+++v+++G+++W++I++ ++ gR++k+c++rw + Rmu_sc0033719.1_g000001.1 10 KGSWSPQEDSTLIKLVAEHGPRNWSLISSSIP-GRSGKSCRLRWCNQ 55 799***************************.*********985 PP
2	Myb_DNA-binding	54.9	2e-17	63	104	2	45
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 +++++ Ed +v+a++++G++ W+tIar ++ gRt++ +k++w+ Rmu_sc0033719.1_g000001.1 63 KPFSPAEDAAIVRAHALHGNK-WATIARLLP-GRTDNAIKNHWN 104 689****************.*****.*********8 PP

Sequence ? help Back to Top
Protein Sequence Length: 105 aa Download sequence
MSGGGDNRVK GSWSPQEDST LIKLVAEHGP RNWSLISSSI PGRSGKSCRL RWCNQLSPDV 60 QHKPFSPAED AAIVRAHALH GNKWATIARL LPGRTDNAIK NHWNS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G37260.1	2e-53	MYB family protein