PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0034080.1_g000001.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family ERF
Protein Properties Length: 152aa    MW: 16825.2 Da    PI: 11.017
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0034080.1_g000001.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP259.67.4e-191563355
                        AP2  3 ykGVrwdkkrgrWvAeIrd.psengkr.krfslgkfgtaeeAakaaiaarkkleg 55
                               ++GVr ++ +gr++AeIrd +     +  r +lg+f+taeeAa+a++aa++ ++g
  Rmu_sc0034080.1_g000001.1 15 FRGVRKRP-WGRYAAEIRDpW-----TkSRKWLGTFDTAEEAARAYDAAARGFRG 63
                               8*******.**********88.....44**********************87765 PP
Sequence ? help Back to Top
Protein Sequence    Length: 152 aa     Download sequence    
GGGGRRSRSS KEGSFRGVRK RPWGRYAAEI RDPWTKSRKW LGTFDTAEEA ARAYDAAARG  60
FRGVRAKTNF ENPAPPKKHA LVIGGKEVLW TPPVRKNDSV PAPAAPVRSE YKGYKLENLG  120
PVVSEQEKKM KLAAESGKKP FQFDLNLPAP SF
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1522RRSRSSKEGSFRGVRKRP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G28360.14e-18ERF family protein