PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0034350.1_g000001.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family HRT-like
Protein Properties Length: 293aa    MW: 32649.1 Da    PI: 10.0354
Description HRT-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0034350.1_g000001.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HRT-like31.33.6e-10273293121
                   HRT-like   1 iCGviledGsvCkrqPvkgRK 21 
                                iCGv+ +dGs+C++ Pv+gRK
  Rmu_sc0034350.1_g000001.1 273 ICGVAVGDGSICRKAPVQGRK 293
                                8*******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 293 aa     Download sequence    
MPLILELEDE EPPMVAGQVL TLAVQSPTLK REERKRLQHG PHFSKWKVLV PPGKDGAERY  60
RVQNLPGNES PGVYELGVAD PRSGSGRGIK ADQIVPVYVG QADSARTRLQ QYGRTGAHLG  120
RSCSGNPSEQ ICKGPGLIEE MLERGYSIVY RWAPMGTKSE AERTERQLLD THDYAWNTRI  180
NGSRRRDDVL QKLKEIPSKP TRFTNIVPRP LPSRQKQVGI RINSSNLVST EDKFSNYADR  240
ESRNLIPQVF KSGRSQPRLV LDGSGITWED TIICGVAVGD GSICRKAPVQ GRK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G56780.16e-64HRT-like family protein