PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Rmu_sc0034955.1_g000003.1

Organism

Rosa multiflora

Taxonomic ID

74647

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa

Family

G2-like

Protein Properties

Length: 196aa MW: 22485.2 Da PI: 11.0564

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Rmu_sc0034955.1_g000003.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	28.2	4.1e-09	11	60	4	50
G2-like 4 lrWtpeLHerFveaveqLGGsek.AtPktil.elm.kvkgLtlehvkSHL 50 ++Wt e H+ Fv v +LGG +k tP+ ++ e+m +vkgL+ + H+ Rmu_sc0034955.1_g000003.1 11 MEWTLEHHKTFVGIVIRLGGFNKiGTPRIVVaEMMnNVKGLSQRTLVQHM 60 89****************988578762566569***99998886 PP
2	G2-like	43.7	6e-14	110	161	5	53
G2-like 5 rWtpeLHerFveaveqLGGsekAtPktilelmkv...kgLtlehvkSHLQkY 53 Wt e H+r veav++LGG kAtP +l+lm+ +gLt+ ++ HL Rmu_sc0034955.1_g000003.1 110 SWTVEHHKRVVEAVTKLGGLSKATPTVVLRLMDEerrQGLTVRTLRLHLSGL 161 6*****************************9633369*******9755 PP
3	Myb_DNA-binding	25	4.3e-08	110	158	3	44
SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT....TTS-HHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGgg...tWktIartmg....kgRtlkqcksrw 44 +WT e +++ v+av++lGg t++ + r m +g+t +++++ Rmu_sc0034955.1_g000003.1 110 SWTVEHHKRVVEAVTKLGGLskaTPTVVLRLMDeerrQGLTVRTLRLHL 158 7***************88************************998 PP

Sequence ? help Back to Top
Protein Sequence Length: 196 aa Download sequence
MDVDGDGQEP MEWTLEHHKT FVGIVIRLGG FNKIGTPRIV VAEMMNNVKG LSQRTLVQHM 60 VWFQIINKRT HLSLDLRTRP PLQPCSDSYQ SLVSHFEGLH VAPPKRLLSS WTVEHHKRVV 120 EAVTKLGGLS KATPTVVLRL MDEERRQGLT VRTLRLHLSG LRYLQKKTQK SIHECSQGKA 180 LRNRKVSTKF KNFVQH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G45580.1	3e-09	G2-like family protein