PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0038366.1_g000001.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family B3
Protein Properties Length: 775aa    MW: 88958.3 Da    PI: 8.7645
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0038366.1_g000001.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B339.11.3e-124791798
                               E--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS
                         B3 17 vlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98
                               +lp kf++++g  ke s   +l+ ++gr+W+v l  ++ ++r+++ k W+ F++   L+ gDf+ F+++g+s+f  +v +f+
  Rmu_sc0038366.1_g000001.1  4 RLPPKFVTKFG--KELSDVAILTVPTGRVWQVGL--ERVDKRIWFVKDWQAFAEYYSLRYGDFLEFRYEGNSNF--RVLIFD 79
                               69*****9998..45888899999**********..**********************************9999..888886 PP
2B346.18.6e-15233328198
                                EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE CS
                         B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkl 84 
                                ff++ +++ +++ + l +p +fae++ +   +s  ++l+ ++g++W+v++ ++ +++  ++ +G  +F  +n+L+ gD+++F+l
  Rmu_sc0038366.1_g000001.1 233 FFSIILQPFNFTYCYLHVPTDFAEKYLSG--CSESIKLQGSHGKQWDVRF-VSTNPSLPIICRGCIQFLTDNNLEYGDVCLFEL 313
                                77888899999***************544..7778***************.566666788999********************* PP

                                -SS.SEE..EEEEE- CS
                         B3  85 dgr.sefelvvkvfr 98 
                                +++  +  l+v+++r
  Rmu_sc0038366.1_g000001.1 314 MKSkADVVLKVSILR 328
                                987788888888877 PP
3B350.92.7e-164155011299
                                HTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTE.EEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EE CS
                         B3  12 ksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgr.yvltkGWkeFvkangLkegDfvvFkldgrsefelvv 94 
                                ++  l +p +fa+++ ++  +   ++l+d++g +W+v+++ ++ s++   +++G + F  +++L++gD+++F+l++r++  l+v
  Rmu_sc0038366.1_g000001.1 415 NNYHLLIPVPFARRYLSS--GAEFIKLQDSNGGQWDVQCSSTNASSSvLRFGRGYNVFLTDKNLEQGDVCLFELIKRNDVLLKV 496
                                455699*********444..3336***************997766665999************************998888999 PP

                                EEE-S CS
                         B3  95 kvfrk 99 
                                +v+r+
  Rmu_sc0038366.1_g000001.1 497 SVLRA 501
                                99987 PP
4B351.22.2e-166867701199
                                HHTT-EE--HHH.HTT.---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..E CS
                         B3  11 lksgrlvlpkkfaeeh.ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelv 93 
                                + ++ lv+p +f ++h g++  +++ +tle ++g++  v++iy   +++  +++GW+ F ++n+L+egD++vF+l+ +++  l+
  Rmu_sc0038366.1_g000001.1 686 H-KSFLVVPAEFDTKHlGYE--CPIFITLEAPNGKRCHVRCIYATDRKK--ISGGWSAFFSENNLEEGDVCVFELIASKDVVLK 764
                                3.4459******99996655..999****************99666666..99***********************99999888 PP

                                EEEE-S CS
                         B3  94 vkvfrk 99 
                                 ++fr+
  Rmu_sc0038366.1_g000001.1 765 ASIFRA 770
                                888885 PP
Sequence ? help Back to Top
Protein Sequence    Length: 775 aa     Download sequence    
MLQRLPPKFV TKFGKELSDV AILTVPTGRV WQVGLERVDK RIWFVKDWQA FAEYYSLRYG  60
DFLEFRYEGN SNFRVLIFDM TCSEIAYPRQ EQSSDLHSMG IHEEDMENDG VCDTLGTTTP  120
LSHASMKRKC KCLDKHVLER RHVLHSGSNL NKSIKRGVTS KENMLYQSDN ETRRKKTRYV  180
DEGDTINSSS VTKSAPASLK ENRMPSSLEL LTKQNDDKKV IQATRMFKLK NPFFSIILQP  240
FNFTYCYLHV PTDFAEKYLS GCSESIKLQG SHGKQWDVRF VSTNPSLPII CRGCIQFLTD  300
NNLEYGDVCL FELMKSKADV VLKVSILRTA EYEDTIDSSN VKKSKRAKLN QNRMCGSQDF  360
SAGQNKDDGM FAFDIFSHTY PKWKLKFPKE TEKVTYATRM FNLKNPFFAV ILQFNNYHLL  420
IPVPFARRYL SSGAEFIKLQ DSNGGQWDVQ CSSTNASSSV LRFGRGYNVF LTDKNLEQGD  480
VCLFELIKRN DVLLKVSVLR ASEYEDMVHD KEKKLDEMKS RSYRNGHEEE IPELVGRLNE  540
KGKSPSHKLS AEDEGNTEFC NSGTLYYSSK IEKTVMSKES RRAFNAAKKF KTENPAFLVF  600
LRHYHKSFLE EIPELVGRLN EKGKSPSHKL SAEDEGNTEF CNSGTLYYSS KIEKTVMSKE  660
SRRAFNAAKK FKTENPAFLV FLRHYHKSFL VVPAEFDTKH LGYECPIFIT LEAPNGKRCH  720
VRCIYATDRK KISGGWSAFF SENNLEEGDV CVFELIASKD VVLKASIFRA AEFAD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18990.14e-48B3 family protein