PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0039000.1_g000001.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family CPP
Protein Properties Length: 229aa    MW: 24809.1 Da    PI: 8.2747
Description CPP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0039000.1_g000001.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCR52.11.3e-164583139
                        TCR  1 kekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNk 39
                               k++kgC C+ks ClkkYCeCf+a++ Cse+CkC dCkN 
  Rmu_sc0039000.1_g000001.1 45 KHHKGCACRKSGCLKKYCECFQANVLCSENCKCMDCKNF 83
                               589***********************************5 PP
Sequence ? help Back to Top
Protein Sequence    Length: 229 aa     Download sequence    
MFGHLVGTDA VGAILERNPK AFRPKIASSP HESRDSWEDA GEVQKHHKGC ACRKSGCLKK  60
YCECFQANVL CSENCKCMDC KNFDGSEERR AIFHEDHNTI ANMQQANAAI SGAIGSSGFG  120
PLVSRQRPSD ELFSGIARDQ SVHRITQAQQ ENHLRPPMAS SSLLSVPTFG TPNAAVSGSS  180
KPTYRSMLAN IIQPENIKDL CSRLVVVSGE AAKALAGLVI YRPPSFFSA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G29000.12e-60CPP family protein