PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0039003.1_g000001.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family MYB_related
Protein Properties Length: 237aa    MW: 25849 Da    PI: 4.9691
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0039003.1_g000001.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding31.63.7e-10188228140
                                TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT.TTS-HHHH CS
            Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmg.kgRtlkqc 40 
                                r++WT+eEd+ lv av+ +G g+W+ I +      Rt++q+
  Rmu_sc0039003.1_g000001.1 188 RKKWTEEEDLELVSAVNIYGEGNWTQIVKANFkGDRTANQL 228
                                79************************954333347888875 PP
Sequence ? help Back to Top
Protein Sequence    Length: 237 aa     Download sequence    
MGFLGRYTAT TILALLQEVA HLLQSEKIDW DKLVANTTTG ITNAREFQML WRHLAYREPL  60
PDKFDDGARP QDVDSDYEYE VEVAPPVSGE ASTEAAACVK VLMASGLPSD SSHLNGTTVE  120
APLTINIPNG QSSKTYEPSA SAKGMNITVP VSIQKQTLPA TTTTAAAKAE GDDANRSTSN  180
IMAPRKKRKK WTEEEDLELV SAVNIYGEGN WTQIVKANFK GDRTANQLSQ VFSCQPK
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1186190KKRKK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G09710.12e-67MYB_related family protein