PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Rmu_sc0039118.1_g000001.1

Organism

Rosa multiflora

Taxonomic ID

74647

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa

Family

bZIP

Protein Properties

Length: 196aa MW: 22052.4 Da PI: 6.254

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Rmu_sc0039118.1_g000001.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	52.3	1.3e-16	57	115	5	63
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 +re+rkq+NRe+A+rsR R+++e+e+L+e ++ L +e ++L +el +l++e+ kl+ e+ Rmu_sc0039118.1_g000001.1 57 RREKRKQSNRESAKRSRFRRQQECEKLRETAALLNSEISELPNELRRLSEECGKLDEEN 115 89******************************************************998 PP

Sequence ? help Back to Top
Protein Sequence Length: 196 aa Download sequence
MGAVQNNSRV LYSGMDTNLK LLNIGVNMPE THPNSGLDLN VSSAHAIHTE EDHDWRRREK 60 RKQSNRESAK RSRFRRQQEC EKLRETAALL NSEISELPNE LRRLSEECGK LDEENSSLID 120 EMEKMYGPDA VADLRAVKVN SSDDGSNSIE SKTPSRDNST SPTPHQKETS PTPEPRLFGV 180 SLRPNLADCL HSSKVQ

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	56	62	RRREKRK
2	56	63	RRREKRKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G36730.1	3e-23	bZIP family protein