PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0039502.1_g000001.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family C2H2
Protein Properties Length: 120aa    MW: 13486.1 Da    PI: 4.7366
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0039502.1_g000001.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H215.45.5e-052743521
                               TTTEEESSHHHHHHHHH CS
                    zf-C2H2  5 dCgksFsrksnLkrHir 21
                                Cg+sFsrks L  H+ 
  Rmu_sc0039502.1_g000001.1 27 TCGTSFSRKSKLFGHMA 43
                               6**************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 120 aa     Download sequence    
CNKKSFSVVA DLKSHLKHCG EARWRCTCGT SFSRKSKLFG HMALFEGHMP AVEDDNKGAA  60
SCLVRAMEEE EEDGEERHRT ASWKGEGSRP IYEDIDFSEE LFSGLGSIEG FCLEDMFVDL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G34370.37e-23C2H2 family protein