PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0039772.1_g000001.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family FAR1
Protein Properties Length: 94aa    MW: 10596.9 Da    PI: 5.1101
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0039772.1_g000001.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR125.54.3e-085693137
                       FAR1  1 kfYneYAkevGFsvrkskskks.krngeitkrtfvCsk 37
                               +fYn+YAk +GF vr ++++ s + +g++t+ ++vCs 
  Rmu_sc0039772.1_g000001.1 56 SFYNAYAKAMGFYVRSDYKRLSiRITGRVTSLRLVCSA 93
                               5******************999999***********97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 94 aa     Download sequence    
MDGSYEPSIS DIGLVSQSSV NGSDCNEMQY KGIRYDKLST EDLKGQEFKI VEEAESFYNA  60
YAKAMGFYVR SDYKRLSIRI TGRVTSLRLV CSAQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G07500.18e-08FAR1 family protein