PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0040156.1_g000006.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family MYB_related
Protein Properties Length: 68aa    MW: 7932.96 Da    PI: 7.5392
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0040156.1_g000006.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding34.83.9e-113167139
                               TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHH CS
            Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkq 39
                               r +WT+eE++++++a +++  + Wk+I   +g  +t  q
  Rmu_sc0040156.1_g000006.1 31 RESWTEEEHDKFLEALQLFDRD-WKKIEDFVG-SKTVIQ 67
                               789*****************77.*********.999876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 68 aa     Download sequence    
MINPSSFNPQ PMSSDASGKK VRKPYTITKS RESWTEEEHD KFLEALQLFD RDWKKIEDFV  60
GSKTVIQV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G09600.11e-33MYB_related family protein