PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0040629.1_g000001.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family TCP
Protein Properties Length: 104aa    MW: 11428 Da    PI: 8.5106
Description TCP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0040629.1_g000001.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCP87.53.1e-272184265
                        TCP  2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt 65
                               + +kd hsk++T++g+Rd  v l a++ ++f+d+qd+LG+d++s +++WL+++akpai+el++ 
  Rmu_sc0040629.1_g000001.1 21 TCRKDHHSKVCTAKGPRDHLVLLAAHTTIQFYDVQDRLGYDRPSMAVDWLIKKAKPAIDELPSW 84
                               789**********************************************************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 104 aa     Download sequence    
TASSCTSSEI VEARGHILRA TCRKDHHSKV CTAKGPRDHL VLLAAHTTIQ FYDVQDRLGY  60
DRPSMAVDWL IKKAKPAIDE LPSWNPNSIF VQTTSSPTVP ISAA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G15030.28e-38TCP family protein