PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0041549.1_g000001.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family NAC
Protein Properties Length: 173aa    MW: 20454.3 Da    PI: 9.9327
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0041549.1_g000001.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM103.92.1e-3271572127
                        NAM   2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk........................kvka..eekewy 59 
                                p+ frF+Pt  el++++L+kk   k+ ++ ++i+++d++k+eP++Lp                         +  +  ++ +wy
  Rmu_sc0041549.1_g000001.1   7 PVEFRFRPTKTELLCDHLAKKNWCKDSQIMSIIPDIDLCKHEPRELPGlaftrqenlgrklyfdfffrftraE--SwySQGKWY 88 
                                6679**********************9**99****************558999***99999999999776431..2435669** PP

                        NAM  60 fFskrdkkyatgkrknratksgyWkatgkdkevlsk.kgelvglkktLvfykgrapkgektdWvmheyr 127
                                fF++r+ ky++++r+nr+t +g Wk tgkd+++++  +++++g k++L+f k   pk++kt  v+hey 
  Rmu_sc0041549.1_g000001.1  89 FFAPREYKYPNSTRSNRTTGEGSWKVTGKDRDIKAPgSEAVIGRKRILTFQKRGVPKSHKTGYVIHEYY 157
                                ***********************************9666779*************************95 PP
Sequence ? help Back to Top
Protein Sequence    Length: 173 aa     Download sequence    
MSCDHFPVEF RFRPTKTELL CDHLAKKNWC KDSQIMSIIP DIDLCKHEPR ELPGLAFTRQ  60
ENLGRKLYFD FFFRFTRAES WYSQGKWYFF APREYKYPNS TRSNRTTGEG SWKVTGKDRD  120
IKAPGSEAVI GRKRILTFQK RGVPKSHKTG YVIHEYYHIQ PHSDPPKQIG DFV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G35580.13e-29NAC family protein