PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0042048.1_g000001.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family MYB_related
Protein Properties Length: 258aa    MW: 29276.5 Da    PI: 4.7523
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0042048.1_g000001.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding38.23.4e-12165206346
                                SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
            Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                                +WT +E +ll++a + +  + W+ Ia+++g +++  qc+++++ 
  Rmu_sc0042048.1_g000001.1 165 NWTDQETLLLLEAMEIYNEN-WNEIAEHVG-TKSKAQCILHFLR 206
                                8****************988.*********.**********986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 258 aa     Download sequence    
TKLTSHLNTE DLTRIVRFLD HWGIINYSAA APSPEPWNGN SYLREEQNGE IHVPSAALKS  60
IDSLIKFDKP RCRLKAADVY KSLSCHDDDD DTSDLDNRIR KRLCENHCNY CSCSLPSVCY  120
QSQKEVDVLL CSDCFHEGRY VVGHSSIDFI RVDSTKDYGD PDGENWTDQE TLLLLEAMEI  180
YNENWNEIAE HVGTKSKAQC ILHFLRLPVE DGLLENIEVP KMPLSSNSSN RDDHGGFYST  240
SNGNSAGVLT YLWFTSFK