PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0042164.1_g000001.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family NAC
Protein Properties Length: 112aa    MW: 13182 Da    PI: 9.2201
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0042164.1_g000001.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM87.32.9e-278112188
                        NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk...............kvkaeekewyfFskrdkkya 69 
                                lp+GfrF+P+deel+++yL+kk ++k+ ++e +i+e+d++k+eP+dLp+               ++++ + +wyfFs+r  k++
  Rmu_sc0042164.1_g000001.1   8 LPKGFRFQPSDEELLSHYLEKKNQRKDPQIEAIIPEIDVCKHEPRDLPAlvftraeflerawftMADSPDMQWYFFSPRVFKHS 91 
                                799***************************999***************66899999999998755555677*******987766 PP

                        NAM  70 ..tgkrknratksgyWkatgk 88 
                                  +++r+nr+t++g Wk++gk
  Rmu_sc0042164.1_g000001.1  92 ksKSTRSNRTTEEGSWKKQGK 112
                                33688**************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 112 aa     Download sequence    
MSSGCITLPK GFRFQPSDEE LLSHYLEKKN QRKDPQIEAI IPEIDVCKHE PRDLPALVFT  60
RAEFLERAWF TMADSPDMQW YFFSPRVFKH SKSKSTRSNR TTEEGSWKKQ GK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G33060.12e-17NAC family protein