PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Rmu_sc0042306.1_g000001.1

Organism

Rosa multiflora

Taxonomic ID

74647

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa

Family

HSF

Protein Properties

Length: 104aa MW: 11925.3 Da PI: 5.1297

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Rmu_sc0042306.1_g000001.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	105	6.2e-33	26	104	2	89
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhks 85 Fl+k+ye+++d+e ++liswse g++f+v+ + efa+++LpkyFkh+nf+SFvRQLn+YgF+kv ++ weF+++ Rmu_sc0042306.1_g000001.1 26 FLTKTYELVDDPEADDLISWSEGGSTFIVWRPAEFARDILPKYFKHNNFSSFVRQLNTYGFRKVVPDR---------WEFANDC 100 9**************************************************************999.........***** PP XXXX CS HSF_DNA-bind 86 Fkkg 89 Fk+g Rmu_sc0042306.1_g000001.1 101 FKRG 104 *996 PP

Sequence ? help Back to Top
Protein Sequence Length: 104 aa Download sequence
MAALPDQNGD SASGGRESQR TIPTPFLTKT YELVDDPEAD DLISWSEGGS TFIVWRPAEF 60 ARDILPKYFK HNNFSSFVRQ LNTYGFRKVV PDRWEFANDC FKRG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G11660.1	6e-55	HSF family protein