PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0042359.1_g000001.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family ERF
Protein Properties Length: 96aa    MW: 11021.7 Da    PI: 9.3041
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0042359.1_g000001.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP234.93.8e-111969256
                        AP2  2 gykGVrwdkkrgrWvAeIrd.psengkr.krfslgkfgtaeeAakaaiaarkklege 56
                               + kGV+++k + +Wv eIr+       +  r +l++f  ae Aa a++ a  +l+++
  Rmu_sc0042359.1_g000001.1 19 KLKGVCQRK-WDKWVLEIRVlG-----TqDRLWLNSFSNAEAAAVARDVAYYCLRKH 69
                               679*****9.**********66.....45*************************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 96 aa     Download sequence    
MSYSSEDNSS PMTARNGRKL KGVCQRKWDK WVLEIRVLGT QDRLWLNSFS NAEAAAVARD  60
VAYYCLRKHW TLESLNFPTN LPCSVNQAAD MLLRLI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G22810.14e-19ERF family protein