PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_ssc0000019.1_g000022.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family E2F/DP
Protein Properties Length: 130aa    MW: 15152.1 Da    PI: 10.2346
Description E2F/DP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_ssc0000019.1_g000022.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1E2F_TDP37.53.9e-121383971
                     E2F_TDP 39 vknkrRRiYDilNVLealnliek.....kekneirwkg 71
                                +++k+RRiYD +NVL ++nliek     + k+++rw g
  Rmu_ssc0000019.1_g000022.1  1 MRTKVRRIYDTANVLLSVNLIEKthtadTGKSAYRWLG 38
                                689***********************999*******87 PP
Sequence ? help Back to Top
Protein Sequence    Length: 130 aa     Download sequence    
MRTKVRRIYD TANVLLSVNL IEKTHTADTG KSAYRWLGLN GRRDGLNLNS EPNLEQAKKR  60
SFVTDLTNSS MVVPRARKGV DINKVYWESL GAYYRPQYQN QELKELFSHY REAWMLWNSQ  120
VAEKNPIQSS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G48160.21e-21E2F/DP family protein