PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Rmu_ssc0000028.1_g000005.1

Organism

Rosa multiflora

Taxonomic ID

74647

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa

Family

bZIP

Protein Properties

Length: 459aa MW: 49642.8 Da PI: 5.2461

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Rmu_ssc0000028.1_g000005.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	47.6	3.7e-15	262	319	3	60
XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklk 60 + kr rr+ +NRe+ArrsR+RK+a + eLe+ + +L eN++L k+l +++++ + Rmu_ssc0000028.1_g000005.1 262 DAKRVRRMLSNRESARRSRRRKQAHLTELETQASQLRVENSSLLKRLTDINQKYNEAS 319 579********************************************99999988765 PP

Sequence ? help Back to Top
Protein Sequence Length: 459 aa Download sequence
MDRVFSSMGE MSDHLWSSSS SCAPVPPGTN VNEDEDELSK MNRSASEWAF QRFLQQEASV 60 SPSSSSQAQN DVEETKVNAT SMALPNGQNP TNTNSSAASF KAPNVPVDSE EYQAFLKTKL 120 DLACAAVALS RVKAPNVPVD SEEYQAFLKT KLDLACAAVA LSRVKGSLVK AQDSASLADS 180 GQQASDALQL GSQAPFEGAG NDLCRSYDKN ATAPLGIPSL PTIQSRSGAS IRQATSASSR 240 ELSDYEEVEG ETAMTENMDP TDAKRVRRML SNRESARRSR RRKQAHLTEL ETQASQLRVE 300 NSSLLKRLTD INQKYNEASV DNRVLRADIE TLRAKVKMAE ETVKRLTGSN SVFHTMSDVS 360 SISMAPFDGS PSETSADAAV PVQDDPNHHY FQPASNNSMP TDFRGNNGLA DNTPSVENAQ 420 QTSAATSKEV VGNKMGRTLS LPRVASLEHL QKRIRGGEQ

Sequence ? help Back to Top

Protein Sequence Length: 459 aa Download sequence

MDRVFSSMGE MSDHLWSSSS SCAPVPPGTN VNEDEDELSK MNRSASEWAF QRFLQQEASV  60
SPSSSSQAQN DVEETKVNAT SMALPNGQNP TNTNSSAASF KAPNVPVDSE EYQAFLKTKL  120
DLACAAVALS RVKAPNVPVD SEEYQAFLKT KLDLACAAVA LSRVKGSLVK AQDSASLADS  180
GQQASDALQL GSQAPFEGAG NDLCRSYDKN ATAPLGIPSL PTIQSRSGAS IRQATSASSR  240
ELSDYEEVEG ETAMTENMDP TDAKRVRRML SNRESARRSR RRKQAHLTEL ETQASQLRVE  300
NSSLLKRLTD INQKYNEASV DNRVLRADIE TLRAKVKMAE ETVKRLTGSN SVFHTMSDVS  360
SISMAPFDGS PSETSADAAV PVQDDPNHHY FQPASNNSMP TDFRGNNGLA DNTPSVENAQ  420
QTSAATSKEV VGNKMGRTLS LPRVASLEHL QKRIRGGEQ

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	277	284	RRSRRRKQ
2	279	284	SRRRKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G28770.2	8e-71	bZIP family protein