PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_ssc0000062.1_g000022.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family NAC
Protein Properties Length: 101aa    MW: 12027.8 Da    PI: 9.658
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_ssc0000062.1_g000022.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM50.47.4e-16219852127
                         NAM  52 kaeekewyfFskrdkkyatgkrknr.atksgyWkatgkdkevlsk.kgelvglkktLvfykgrapkgektdWvmheyr 127
                                 + +++ew++Fs++d k+++++ +   at++g+Wk t k+ ++ ++ +++++  k++L+fy g+ ++g++t+  +hey 
  Rmu_ssc0000062.1_g000022.1  21 RLDDEEWFYFSRSDYKSNKKQGQDNwATERGIWKITAKECDIRARgSKAVIRRKRILTFYIGKVRSGQNTSLEIHEYY 98 
                                 45789*********999987766555******************95556689999**********************6 PP
Sequence ? help Back to Top
Protein Sequence    Length: 101 aa     Download sequence    
MLCFVETEIM KLGVSVFSLI RLDDEEWFYF SRSDYKSNKK QGQDNWATER GIWKITAKEC  60
DIRARGSKAV IRRKRILTFY IGKVRSGQNT SLEIHEYYIY T
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G33060.19e-13NAC family protein