PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_ssc0000093.1_g000019.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family TCP
Protein Properties Length: 117aa    MW: 13126.8 Da    PI: 10.3986
Description TCP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_ssc0000093.1_g000019.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCP82.51.1e-2555116263
                         TCP   2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikelt 63 
                                 + +kd hsk++T++g Rd RvRl  ++ ++f+d+qd+L +d++sk+i+W +++ak+ai+el+
  Rmu_ssc0000093.1_g000019.1  55 TDRKDCHSKVYTAKGARDHRVRLATHTTIQFYDVQDRLRYDRPSKAIDWVIKKAKAAIDELP 116
                                 569*********************************************************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 117 aa     Download sequence    
MEYAGRKMGE SHNSLHHRAM TSSSTASRLG LGIRTASSSN TSEIVEAPGH ILRPTDRKDC  60
HSKVYTAKGA RDHRVRLATH TTIQFYDVQD RLRYDRPSKA IDWVIKKAKA AIDELPP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G15030.23e-32TCP family protein