PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_ssc0000110.1_g000001.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family GeBP
Protein Properties Length: 214aa    MW: 23963.3 Da    PI: 10.3201
Description GeBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_ssc0000110.1_g000001.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF57368.81.2e-211643497
                      DUF573 34 idafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifelskkiWg 97
                                + af+ef+k+s++++vsk+ql++K rrLKkK++++ +k ++g+ p+fsk+h+ k+f+lskkiWg
  Rmu_ssc0000110.1_g000001.1  1 MGAFHEFLKRSLKADVSKNQLMDKTRRLKKKYHTNAEKGENGEGPVFSKAHELKSFDLSKKIWG 64
                                579************************************************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 214 aa     Download sequence    
MGAFHEFLKR SLKADVSKNQ LMDKTRRLKK KYHTNAEKGE NGEGPVFSKA HELKSFDLSK  60
KIWGAEANGG DDSAKNSRKK PRKSAKANNN NNSSTVLALP VSDAAAERSV EKKVKVEEMN  120
VANGGVKAAE SDDFWSKYPS LSDSLQLANC SSRWEGLERV MIQKMPSIGS SKAKELDDRW  180
RKLQLLEMEL SVKKLDLMHE QAKLLLDGIK SRKD
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
179115KKPRKSAKANNNNNSSTVLALPVSDAAAERSVEKKVK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G11510.16e-15GeBP family protein