PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Rmu_ssc0000160.1_g000008.1

Organism

Rosa multiflora

Taxonomic ID

74647

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa

Family

DBB

Protein Properties

Length: 296aa MW: 32476.1 Da PI: 6.7735

Description

DBB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Rmu_ssc0000160.1_g000008.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-B_box	21.1	6.3e-07	4	43	5	38
zf-B_box 5 kCpeHeekelqlfCedCqqllCedClleeHkg......Ht 38 C+ +++ ++ fC+ ++ lC+ C H+ H+ Rmu_ssc0000160.1_g000008.1 4 QCDACNKDDASVFCTADEAALCDGCDHRVHHAnklaskHQ 43 7****99****************9964446666676 PP
2	zf-B_box	24.8	4.6e-08	56	93	3	38
zf-B_box 3 erkCpeHeekelqlfCedCqqllCedClleeHkg..Ht 38 C+ ++e ++ lfC++++ lC++C ++H+ Ht Rmu_ssc0000160.1_g000008.1 56 SALCDICQERRAFLFCQQDRAILCRECDGSIHSAneHT 93 568*****************************657765 PP

Sequence ? help Back to Top
Protein Sequence Length: 296 aa Download sequence
MKIQCDACNK DDASVFCTAD EAALCDGCDH RVHHANKLAS KHQRFSLIHP SSSKESALCD 60 ICQERRAFLF CQQDRAILCR ECDGSIHSAN EHTQKHNRYL FTGVKLSATS TVYASSDSAA 120 VTHLKPQPLI NKKPISVSSA ISSPPSVPKI SNSTSNSTKN GGNLLPYDGV GSMSSISEYL 180 TETLPGWHVE DLLDFSSNHP FGFCKADNGA TFFDDDIESN LSSFSSENMG IWVPQAPNPS 240 LQHSQMGFKE TTKEATNMNT IKANYNNNYR SLWNDDGFTV PQISPPSVGS KRSRPF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G75540.1	5e-82	DBB family protein