PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_ssc0000161.1_g000025.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family FAR1
Protein Properties Length: 220aa    MW: 25830.5 Da    PI: 4.8261
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_ssc0000161.1_g000025.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR128.35.7e-09141187147
                        FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk 47 
                                 kfY+ Y++ +GFs+rk+k+  +++++++++r++vCsk  ++ + +k+
  Rmu_ssc0000161.1_g000025.1 141 KFYKYYSHVAGFSTRKAKKDIHQTKQTVYRRQWVCSKASRHVSVQKT 187
                                 6************************************9988877776 PP
Sequence ? help Back to Top
Protein Sequence    Length: 220 aa     Download sequence    
MDSSEEEGLR FTDYNYHNQV FSDEEEDEPL RFESSEEEGL RFTDYNYHNQ VFSDEEEDEP  60
LRFERLSNCF GEVPVIETMP PNKATALEGE IEMNGCNQFK KVVPDLGVEF GNVELNGRNF  120
KDIIYEDVKH LWFRTIDEAE KFYKYYSHVA GFSTRKAKKD IHQTKQTVYR RQWVCSKASR  180
HVSVQKTKEV GGCGMKEAPN GDKNKVFRKR FASWNEDISN