PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Rmu_ssc0000186.1_g000028.1

Organism

Rosa multiflora

Taxonomic ID

74647

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa

Family

FAR1

Protein Properties

Length: 240aa MW: 27680.7 Da PI: 8.5621

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Rmu_ssc0000186.1_g000028.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	84.3	2e-26	75	163	2	90
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtklele 84 fY++YA+++GF +r+ + ++s+r+g+i r++ C+keg+ + + k r++ra+tr gCka+++vk +k+gkw++tk+++e Rmu_ssc0000186.1_g000028.1 75 FYDDYARRLGFVMRVMSCRRSERDGRILARRLGCNKEGHCVSIRGKFGPVRKPRASTREGCKAMIHVKYDKSGKWVITKFVKE 157 9************************************99999998******************************** PP FAR1 85 HnHela 90 HnH+l+ Rmu_ssc0000186.1_g000028.1 158 HNHSLV 163 *996 PP

Sequence ? help Back to Top
Protein Sequence Length: 240 aa Download sequence
MTYEISDDLF GGPPMRFSEK FCGQRLLASR EQTSPLALLQ SMDSGTQEVV AYEGEAILEP 60 YEGMEFESED AAKIFYDDYA RRLGFVMRVM SCRRSERDGR ILARRLGCNK EGHCVSIRGK 120 FGPVRKPRAS TREGCKAMIH VKYDKSGKWV ITKFVKEHNH SLVVSPREAR QTMDEKDKKI 180 QELSAELRNK KRLCTTYQEQ LTAFMKIVEE YNDQLSLKVK NVVNNLKEFE SIDVELTQRG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G43280.1	1e-110	FAR1 family protein