PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_ssc0000213.1_g000091.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family HB-other
Protein Properties Length: 176aa    MW: 19216.7 Da    PI: 9.1328
Description HB-other family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_ssc0000213.1_g000091.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox17.95.1e-063368538
                                SS--HHHHHHHHHHHHH..SSS--HHHHHHHHHHCT CS
                    Homeobox  5 ttftkeqleeLeelFek..nrypsaeereeLAkklg 38
                                + +t++q+++L+el+     + p+ e+ ++++ +l+
  Rmu_ssc0000213.1_g000091.1 33 WLPTRDQIRILKELYDDkgVKSPTVEQVQRITLQLK 68
                                889*************6579**************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 176 aa     Download sequence    
MEPQNRNPTE DGGSNKAVES SLNMYCKQSN TMWLPTRDQI RILKELYDDK GVKSPTVEQV  60
QRITLQLKWA REKLKNNKLT SDVQVPKQRS GLVGGSINLN FGSNSSAGVG GSIMEQLGED  120
HKEIKTLPLF PMHGEDIFGN MKTTSDGGGG HGGGSYISLE LSLSCEGKAG KSFRSR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G17950.13e-12WOX family protein