PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_ssc0000255.1_g000061.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family TCP
Protein Properties Length: 158aa    MW: 18167.4 Da    PI: 10.5557
Description TCP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_ssc0000255.1_g000061.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCP55.22.8e-171569163
                         TCP  1 aagkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikelt 63
                                a+g+kdrhsk++T +g      Rl+a++a++f+d+qd+LG+d++sk+++W     + +i+ l 
  Rmu_ssc0000255.1_g000061.1 15 ATGRKDRHSKVCTTKGY-----RLVAHTAIQFYDMQDRLGYDRPSKAVDW---RGENQIIRLR 69
                                589*************7.....6***************************...5666666655 PP
Sequence ? help Back to Top
Protein Sequence    Length: 158 aa     Download sequence    
MGESHNNLHH RTTTATGRKD RHSKVCTTKG YRLVAHTAIQ FYDMQDRLGY DRPSKAVDWR  60
GENQIIRLRL QSASWRLKRG ESSGASGEIP QQIKQLTSLS YVNVSPNNLT GSIPQGCQFN  120
TFKRTSFEGT RDCVENHCQR NVEMLRLQLH ATLKHRWS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G31070.12e-22TCP family protein