PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_ssc0000289.1_g000032.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family TCP
Protein Properties Length: 203aa    MW: 23476.9 Da    PI: 7.2973
Description TCP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_ssc0000289.1_g000032.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCP68.32.5e-21162202343
                         TCP   3 gkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdk 43 
                                  kkdrhski+T++g+RdRR+Rls+++a++fF Lqd+LGfdk
  Rmu_ssc0000289.1_g000032.1 162 CKKDRHSKISTARGLRDRRMRLSLDVARKFFGLQDMLGFDK 202
                                 69**************************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 203 aa     Download sequence    
MFSYSSNAIS TGTTGNYYEP AVPFPHDQSF LIHSRPFLNS TTNPNCNSAS VISNSKQDQD  60
LQEEPHHHIH PPLSFFYFPS PFEDDDVLLH QHHHHHDLSS LHENTLFTHH HHHHRHHHQT  120
GTPLTATMVE GDSNKDDQVV IGKEGEQQQQ QQKQIPMTRR SCKKDRHSKI STARGLRDRR  180
MRLSLDVARK FFGLQDMLGF DKV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68800.16e-17TCP family protein