PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Rmu_ssc0000339.1_g000019.1

Organism

Rosa multiflora

Taxonomic ID

74647

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa

Family

ERF

Protein Properties

Length: 117aa MW: 13903.9 Da PI: 6.7119

Description

ERF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Rmu_ssc0000339.1_g000019.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	28	5.3e-09	70	105	18	56
AP2 18 eIrd.psengkr.krfslgkfgtaeeAakaaiaarkklege 56 Ird + r r++lg+f t+eeAa a++ + k++ge Rmu_ssc0000339.1_g000019.1 70 KIRDrC-----RlVRVWLGTFQTEEEAAMAYDTEAIKFRGE 105 577733.....58************************9997 PP

Sequence ? help Back to Top
Protein Sequence Length: 117 aa Download sequence
MDELSTELDL EREGKLIMRN WGFEGWPDES GSRRTSAKFN KRRVILGLFD RGLFLRLILV 60 VGFNFCDWLK IRDRCRLVRV WLGTFQTEEE AAMAYDTEAI KFRGERAETS FMSRERE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G13330.1	6e-12	ERF family protein