PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_ssc0000368.1_g000076.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family Dof
Protein Properties Length: 266aa    MW: 29088.9 Da    PI: 8.5642
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_ssc0000368.1_g000076.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof1261.2e-391979262
                      zf-Dof  2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62
                                ++++l+cprC+stntkfCyynnysl+qPryfCk+CrryWt+GG+lrnvPvGgg+rknkks+
  Rmu_ssc0000368.1_g000076.1 19 PQEQLNCPRCNSTNTKFCYYNNYSLTQPRYFCKTCRRYWTEGGTLRNVPVGGGSRKNKKST 79
                                6899******************************************************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 266 aa     Download sequence    
MEENMGSDAR LASEKRARPQ EQLNCPRCNS TNTKFCYYNN YSLTQPRYFC KTCRRYWTEG  60
GTLRNVPVGG GSRKNKKSTS STASSSAISS SKNIIPDLNP PNLSHFSSQN PRMTHEGQDL  120
NLAFSANVEH YNGTSSAHYV DHHQVPKMES NNSSALELLR GTGIASRGVN SYIPNSIQDS  180
NAVLYSSSGF SLQEFKPSQL GFCVDGVGSR YGDHPQENGG SGRLLFPFGD LKQISSTTTG  240
HHELDQNKGQ GNPSGYWNGL MGGGSW
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G61850.41e-71Dof family protein