PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_ssc0000399.1_g000021.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family WRKY
Protein Properties Length: 168aa    MW: 18527.8 Da    PI: 8.4554
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_ssc0000399.1_g000021.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY33.86.7e-11147168122
                                 ---SS-EEEEEEE--TT-SS-E CS
                        WRKY   1 ldDgynWrKYGqKevkgsefpr 22 
                                 ldDgy+WrKYGqK vk+s +pr
  Rmu_ssc0000399.1_g000021.1 147 LDDGYRWRKYGQKAVKNSLYPR 168
                                 59*******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 168 aa     Download sequence    
MEGGQEHMNP PPTSSTTLPL SLPLILPPQN PSYQLFTPSG LNPPPLPLLQ PHDHQSLNPL  60
DIDWISLLSG QAGHHGLVSH DQISNYRAVT GMVDLSTASG SAGENTIEGD DDPEQKGCKK  120
RKVGGYKMRK ATRPRFAFQT RSADDILDDG YRWRKYGQKA VKNSLYPR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G46130.11e-17WRKY family protein