PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_ssc0000434.1_g000060.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family MYB_related
Protein Properties Length: 109aa    MW: 12183.6 Da    PI: 4.9663
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_ssc0000434.1_g000060.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding26.12e-08755348
                                SS-HHHHHHHHHHHHHTTTT....-HHHHHHHHTTTS-HHHHHHHHHHHT CS
             Myb_DNA-binding  3 rWTteEdellvdavkqlGgg....tWktIartmgkgRtlkqcksrwqkyl 48
                                 WT eE + +  a +   +      W++Ia+ ++ g++  q+k +++++l
  Rmu_ssc0000434.1_g000060.1  7 QWTREENKAFEVALAANWNCiekgEWEKIASSIP-GKSIDQIKAHFRQLL 55
                                7*****************99**************.************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 109 aa     Download sequence    
MAGTSDQWTR EENKAFEVAL AANWNCIEKG EWEKIASSIP GKSIDQIKAH FRQLLDDVAA  60
IEDDQVPFPS YADEDYPIKE VRSGVQDGKD FGGEPKAVKR QAKSVKKTK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G08520.11e-16MYB family protein