PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_ssc0000438.1_g000002.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family WOX
Protein Properties Length: 196aa    MW: 21682.3 Da    PI: 9.0974
Description WOX family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_ssc0000438.1_g000002.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox54.61.8e-173090256
                                T--SS--HHHHHHHHHHHHH..SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHH CS
                    Homeobox  2 rkRttftkeqleeLeelFek..nrypsaeereeLAkkl....gLterqVkvWFqNrRakek 56
                                 +R+ +t++q+++L+el+     + p+ e+ ++++ +l    +++ ++V++WFqN+Ra+ek
  Rmu_ssc0000438.1_g000002.1 30 NTRWLPTTDQIRILKELYDDkgVKSPTVEQVQRITLQLkwygQIENKNVFYWFQNQRAREK 90
                                58*****************6579*************************************9 PP
2Wus_type_Homeobox96.52.2e-312990262
           Wus_type_Homeobox  2 artRWtPtpeQikiLeelyk.sGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRer 62
                                ++tRW Pt++Qi+iL+ely+ +G+++P+ e++qrit +L+ yG+ie+kNVfyWFQN++aRe+
  Rmu_ssc0000438.1_g000002.1 29 SNTRWLPTTDQIRILKELYDdKGVKSPTVEQVQRITLQLKWYGQIENKNVFYWFQNQRAREK 90
                                789****************999***************************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 196 aa     Download sequence    
MEPQNRHPTE DGGSNKAAES SPNMHCKQSN TRWLPTTDQI RILKELYDDK GVKSPTVEQV  60
QRITLQLKWY GQIENKNVFY WFQNQRAREK LSKKKLTSDV QVPTQRSRLV GGSINLNFGS  120
TSSAGVGGSI MEQRGEDHQE IKTLPLFPMH SEDIFGNMKT TSDGGGGHGG GSYISLELNL  180
SCRAKLEKVS GAADSA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G17950.18e-28WOX family protein