PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Rmu_ssc0000438.1_g000005.1

Organism

Rosa multiflora

Taxonomic ID

74647

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa

Family

HB-other

Protein Properties

Length: 124aa MW: 13782.4 Da PI: 9.6579

Description

HB-other family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Rmu_ssc0000438.1_g000005.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	23.4	1e-07	3	21	38	56
TS-HHHHHHHHHHHHHHHH CS Homeobox 38 gLterqVkvWFqNrRakek 56 +++ ++V++WFqN+Ra+ek Rmu_ssc0000438.1_g000005.1 3 QIENKNVFYWFQNQRAREK 21 5899**************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 124 aa Download sequence
MEQIENKNVF YWFQNQRARE KLKKRNLTSD VQVPKQRSGL VGGSINLNFG STSSADVGGS 60 IMEQRGEDHQ EVKTVPLFPM HSEDIFGNMK TTSDRGGGHG GGSYISLELS LSCEGKAGKR 120 FWSR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G11260.1	1e-08	WOX family protein