PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_ssc0000472.1_g000015.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family WOX
Protein Properties Length: 176aa    MW: 19264.7 Da    PI: 8.4992
Description WOX family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_ssc0000472.1_g000015.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox222.8e-073175340
                                --SS--HHHHHHHHHHHHH..SSS--HHHHHHHHHHC.....TS- CS
                    Homeobox  3 kRttftkeqleeLeelFek..nrypsaeereeLAkkl.....gLt 40
                                +R+ +t++q+++L+el+     + p+ e+ ++++ +l     +L+
  Rmu_ssc0000472.1_g000015.1 31 TRWLPTTDQIRILKELYDDkgVMSPTVEQVQRITLQLkwareKLK 75
                                7*****************6569**************955555554 PP
2Wus_type_Homeobox42.31.9e-143068340
           Wus_type_Homeobox  3 rtRWtPtpeQikiLeelyk.sGlrtPnkeeiqritaeLe 40
                                +tRW Pt++Qi+iL+ely+ +G+ +P+ e++qrit +L+
  Rmu_ssc0000472.1_g000015.1 30 NTRWLPTTDQIRILKELYDdKGVMSPTVEQVQRITLQLK 68
                                79****************999****************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 176 aa     Download sequence    
MEPQNRHPTQ DGGSNKAAES SPNMHCKQCN TRWLPTTDQI RILKELYDDK GVMSPTVEQV  60
QRITLQLKWA REKLKKKNLT SDVQVPKQRS GLVGGSINLN FGLTSSADVG GSIMEQRGED  120
HQEVKTLPLF PMHSEDIFGN LKTTSDGGGG HGGGSYISLE LSLSCEGKAG KSFRSH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G17950.12e-13WOX family protein