PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Ro01_G01098
Organism
Rubus occidentalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rubus
Family bZIP
Protein Properties Length: 157aa    MW: 17786.9 Da    PI: 4.9597
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Ro01_G01098genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_142.11.9e-133391563
                 CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
       bZIP_1  5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63
                 ++ +r+ +NRe+ArrsR RK++ +  L+  v  L +eN +    ++  ++++ +l++e+
  Ro01_G01098 33 RKRKRMVSNRESARRSRMRKQEHLTDLTAQVGLLIKENNQILTSMNLTNQLYLNLEAEN 91
                 678999*****************************************999999999987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 157 aa     Download sequence    
MATSSGNSSG SSTLQIVNSG SDQEGLRQVM DQRKRKRMVS NRESARRSRM RKQEHLTDLT  60
AQVGLLIKEN NQILTSMNLT NQLYLNLEAE NSVLRAQIAE LSNRLHSLND IIDCIDSSKW  120
LLDTEEEQDM TTQFGGDGFL NPWSNLSFNQ PVDMFMC
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
14653RRSRMRKQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75390.11e-41bZIP family protein