PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Ro01_G05088
Organism
Rubus occidentalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rubus
Family G2-like
Protein Properties Length: 89aa    MW: 10015.5 Da    PI: 6.2308
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Ro01_G05088genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like521.6e-161666455
      G2-like  4 lrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55
                 ++W   LH +Fv av+ L   ++A P+ +l+lm+v+ +++e+v+ HLQ+YR 
  Ro01_G05088 16 MVWPMYLHIKFVAAVNVL-ALDNADPRDVLDLMDVDYVSVENVAIHLQRYRR 66
                 89****************.9*******************************5 PP
Sequence ? help Back to Top
Protein Sequence    Length: 89 aa     Download sequence    
MACNQNSSSQ TKQRPMVWPM YLHIKFVAAV NVLALDNADP RDVLDLMDVD YVSVENVAIH  60
LQRYRRSLER MASHEASILA ASLAATNLE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G25180.11e-11ARR-B family protein