PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Ro01_G24780

Organism

Rubus occidentalis

Taxonomic ID

75079

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rubus

Family

Dof

Protein Properties

Length: 344aa MW: 39434.7 Da PI: 9.8305

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Ro01_G24780	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	55.1	1.6e-17	273	327	4	57
zf-Dof 4 kalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPv.Gggrrk 57 ++l+cprC+stntkf +s Pry Ck+C+ Wt GG +r v Gg r+ Ro01_G24780 273 QKLQCPRCESTNTKFSVLKAKRISAPRYHCKNCKMEWTLGGEIRKAIVlGGLNRR 327 789*****************************************85551665565 PP

Sequence ? help Back to Top
Protein Sequence Length: 344 aa Download sequence
MVNLGDHRRL KEILRPLLIG KCCSIPWRLN TAMTDFTLID SETEIEGSRG NSRTGVSMAE 60 GSSIEGPQRK RLLLHLKDLH EENKTLMKLV ADKDKRIESY MVDFEELQSL KINVNKLEKQ 120 NLKLTQANSQ MLQELRNLRN LVHKEQQPNL QPAQEIIQVQ AVQPLNLQPA QARIQVQELE 180 PTKLQPAQPK IQMQEEEPDL VNSQILLELN SHEDMLSSTD EAVRECIDMI EKLQASGPPT 240 NEAIQQVKAK LQALGPLTID AVQQIRVGFR KLQKLQCPRC ESTNTKFSVL KAKRISAPRY 300 HCKNCKMEWT LGGEIRKAIV LGGLNRRDLL QQRVQRVQRR RMKT

Sequence ? help Back to Top

Protein Sequence Length: 344 aa Download sequence

MVNLGDHRRL KEILRPLLIG KCCSIPWRLN TAMTDFTLID SETEIEGSRG NSRTGVSMAE  60
GSSIEGPQRK RLLLHLKDLH EENKTLMKLV ADKDKRIESY MVDFEELQSL KINVNKLEKQ  120
NLKLTQANSQ MLQELRNLRN LVHKEQQPNL QPAQEIIQVQ AVQPLNLQPA QARIQVQELE  180
PTKLQPAQPK IQMQEEEPDL VNSQILLELN SHEDMLSSTD EAVRECIDMI EKLQASGPPT  240
NEAIQQVKAK LQALGPLTID AVQQIRVGFR KLQKLQCPRC ESTNTKFSVL KAKRISAPRY  300
HCKNCKMEWT LGGEIRKAIV LGGLNRRDLL QQRVQRVQRR RMKT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G55370.1	3e-14	Dof family protein