PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Ro02_G00472

Organism

Rubus occidentalis

Taxonomic ID

75079

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rubus

Family

bZIP

Protein Properties

Length: 159aa MW: 18340.3 Da PI: 8.228

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Ro02_G00472	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	33.8	7.2e-11	70	119	5	54
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkk 54 + rrk +NRe+ArrsR RKk +e L+e++ L eN++Lk++l + Ro02_G00472 70 RQKRRKTSNRESARRSRWRKKRHLEDLTEEASRLRMENRELKNRLGLVAQ 119 467999************************************99977655 PP

Sequence ? help Back to Top
Protein Sequence Length: 159 aa Download sequence
MSECTSPALF FTGAEEPVQF QCPAQETGFT TSDIEELLSL LQEGNSNSNS GSPNSGSEGS 60 NRAVYSVDER QKRRKTSNRE SARRSRWRKK RHLEDLTEEA SRLRMENREL KNRLGLVAQK 120 FHVTWRENER LESESLALWA RLSDLNRVLV AMQMQQSQY

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	72	91	KRRKTSNRESARRSRWRKKR
2	73	92	KRRKTSNRESARRSRWRKKR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G59530.1	1e-19	bZIP family protein