PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Ro02_G01616
Organism
Rubus occidentalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rubus
Family bZIP
Protein Properties Length: 162aa    MW: 17603.3 Da    PI: 9.7117
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Ro02_G01616genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_134.64.2e-1188141761
                  HHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
       bZIP_1   7 errkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklks 61 
                  e ++ k R++A+  R+RKka++  Le +vk Le++N++L ++l++l++e + l+ 
  Ro02_G01616  88 ESKRLK-RVSAQQARERKKAYLSDLEVRVKDLEQKNSELDERLSTLQNENQMLRH 141
                  445555.9******************************************98865 PP
Sequence ? help Back to Top
Protein Sequence    Length: 162 aa     Download sequence    
MQDQATTSSL AASSLPSSSE RSSSSAFQLE VKEGMESDEE IRRVPEIGGE SAGASVSGRE  60
NSSLAGPDRV QAAGESQRKR GRTPADKESK RLKRVSAQQA RERKKAYLSD LEVRVKDLEQ  120
KNSELDERLS TLQNENQMLR HILKNTTASR RGGNGANADG SL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G11260.12e-63bZIP family protein