PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Ro02_G02209
Organism
Rubus occidentalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rubus
Family bZIP
Protein Properties Length: 234aa    MW: 25201.2 Da    PI: 9.8719
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Ro02_G02209genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_129.22e-09136170438
                  XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
       bZIP_1   4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeL 38 
                  + r rr++kNRe+A+rsR+RK+++ e+ ++k +++
  Ro02_G02209 136 RVRHRRMIKNRESASRSRARKQERGECQTQKTASK 170
                  6799*********************9999988765 PP
Sequence ? help Back to Top
Protein Sequence    Length: 234 aa     Download sequence    
MEDVWKDISL ASLCEHNSPA AANSATTNDR AALRGFIFQD FLAVASTKLV PASGLAAAPP  60
PTTLLSLSSS GSDQHQIQST ATFITNTSAP VKPNPQRLHG TSTTSSSLIS LSANNLSVAL  120
DCKKRAVEES GDNSRRVRHR RMIKNRESAS RSRARKQERG ECQTQKTASK VQLSSPCSSS  180
INFSASKKGT LSIEKKEPDV WFGCQVTMPI QAFGEYDSHK TEGEVGGWRV GGIY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G35900.13e-06bZIP family protein